I went to my computer and made a new directory for the temp map and set it to that map. The program then started. I was able to revert the changes (registry backup) and the computer works as before. The reason i started the tweaking program was because i was unable to run windows update , even after everything i tried (ms fixit tools and what nots)
I tried the tweak program on a sbs 2011 server , dangerous, i know, but its my own server, no one elses
I think where everythings going wrong is when the program sets all the permissions on the files.
Thanks for your quick reply!